Characterization and expression analysis under bending and other abiotic factors of PtaZFP2, a poplar gene encoding a Cys2/His2 zinc finger protein.
Identifieur interne : 003690 ( Main/Exploration ); précédent : 003689; suivant : 003691Characterization and expression analysis under bending and other abiotic factors of PtaZFP2, a poplar gene encoding a Cys2/His2 zinc finger protein.
Auteurs : Ludovic Martin [France] ; Nathalie Leblanc-Fournier ; Wassim Azri ; Catherine Lenne ; Clémence Henry ; Catherine Coutand ; Jean-Louis JulienSource :
- Tree physiology [ 0829-318X ] ; 2009.
Descripteurs français
- KwdFr :
- ADN complémentaire (isolement et purification), ARN messager (métabolisme), Adaptation physiologique (MeSH), Arbres (MeSH), Cystéine (MeSH), Doigts de zinc (génétique), Doigts de zinc (physiologie), Données de séquences moléculaires (MeSH), Expression des gènes (MeSH), Facteurs de transcription (métabolisme), Gravitropisme (génétique), Gravitropisme (physiologie), Gènes de plante (MeSH), Histidine (MeSH), Mécanotransduction cellulaire (MeSH), Phénomènes mécaniques (MeSH), Populus (génétique), Populus (métabolisme), Populus (physiologie), Régions promotrices (génétique) (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Stress physiologique (MeSH), Séquence nucléotidique (MeSH), Tiges de plante (MeSH), Tolérance au sel (MeSH).
- MESH :
- génétique : Doigts de zinc, Gravitropisme, Populus.
- isolement et purification : ADN complémentaire.
- métabolisme : ARN messager, Facteurs de transcription, Populus.
- physiologie : Doigts de zinc, Gravitropisme, Populus.
- Adaptation physiologique, Arbres, Cystéine, Données de séquences moléculaires, Expression des gènes, Gènes de plante, Histidine, Mécanotransduction cellulaire, Phénomènes mécaniques, Régions promotrices (génétique), Régulation de l'expression des gènes végétaux, Stress physiologique, Séquence nucléotidique, Tiges de plante, Tolérance au sel.
English descriptors
- KwdEn :
- Adaptation, Physiological (MeSH), Base Sequence (MeSH), Cysteine (MeSH), DNA, Complementary (isolation & purification), Gene Expression (MeSH), Gene Expression Regulation, Plant (MeSH), Genes, Plant (MeSH), Gravitropism (genetics), Gravitropism (physiology), Histidine (MeSH), Mechanical Phenomena (MeSH), Mechanotransduction, Cellular (MeSH), Molecular Sequence Data (MeSH), Plant Stems (MeSH), Populus (genetics), Populus (metabolism), Populus (physiology), Promoter Regions, Genetic (MeSH), RNA, Messenger (metabolism), Salt Tolerance (MeSH), Stress, Physiological (MeSH), Transcription Factors (metabolism), Trees (MeSH), Zinc Fingers (genetics), Zinc Fingers (physiology).
- MESH :
- chemical , isolation & purification : DNA, Complementary.
- chemical , metabolism : RNA, Messenger, Transcription Factors.
- chemical : Cysteine, Histidine.
- genetics : Gravitropism, Populus, Zinc Fingers.
- metabolism : Populus.
- physiology : Gravitropism, Populus, Zinc Fingers.
- Adaptation, Physiological, Base Sequence, Gene Expression, Gene Expression Regulation, Plant, Genes, Plant, Mechanical Phenomena, Mechanotransduction, Cellular, Molecular Sequence Data, Plant Stems, Promoter Regions, Genetic, Salt Tolerance, Stress, Physiological, Trees.
Abstract
In plants, mechanoperception and transduction of mechanical signals have been studied essentially in Arabidopsis thaliana L. and Lycopersicon esculentum L. plants, i.e., in nonwoody plants. Here, we have described the isolation of both the full-length cDNA and the regulatory region of PtaZFP2, encoding a member of Cys2/His2 zinc finger protein (ZFP) family in Populus tremula L. x Populus alba L. Time course analysis of expression demonstrated that PtaZFP2 mRNA accumulated as early as 5 min in response to a controlled stem bending and is restricted to the organ where the mechanical stimulus is applied. The real-time quantitative Reverse Transcriptase Polymerase Chain Reaction experiments showed that PtaZFP2 was also rapidly up-regulated in poplar stems in response to gravitropism suggesting that PtaZFP2 is induced by different mechanical signals. Abundance of PtaZFP2 transcripts also increased highly in response to wounding and to a weaker extent to salt treatment and cold, which is consistent with the numerous putative cis-elements found in its regulatory region. As in other species, these data suggest that Cys2/His2 ZFPs could function in poplar as key transcriptional regulators in the acclimation response to different environmental factors.
DOI: 10.1093/treephys/tpn011
PubMed: 19203938
Affiliations:
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sort="Julien, Jean Louis" uniqKey="Julien J" first="Jean-Louis" last="Julien">Jean-Louis Julien</name></author></analytic><series><title level="j">Tree physiology</title><idno type="ISSN">0829-318X</idno><imprint><date when="2009" type="published">2009</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adaptation, Physiological (MeSH)</term><term>Base Sequence (MeSH)</term><term>Cysteine (MeSH)</term><term>DNA, Complementary (isolation & purification)</term><term>Gene Expression (MeSH)</term><term>Gene Expression Regulation, Plant (MeSH)</term><term>Genes, Plant (MeSH)</term><term>Gravitropism (genetics)</term><term>Gravitropism (physiology)</term><term>Histidine (MeSH)</term><term>Mechanical Phenomena (MeSH)</term><term>Mechanotransduction, Cellular (MeSH)</term><term>Molecular Sequence Data (MeSH)</term><term>Plant Stems (MeSH)</term><term>Populus (genetics)</term><term>Populus (metabolism)</term><term>Populus (physiology)</term><term>Promoter Regions, Genetic (MeSH)</term><term>RNA, Messenger (metabolism)</term><term>Salt Tolerance (MeSH)</term><term>Stress, Physiological (MeSH)</term><term>Transcription Factors (metabolism)</term><term>Trees (MeSH)</term><term>Zinc Fingers (genetics)</term><term>Zinc Fingers (physiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN complémentaire (isolement et purification)</term><term>ARN messager (métabolisme)</term><term>Adaptation physiologique (MeSH)</term><term>Arbres (MeSH)</term><term>Cystéine (MeSH)</term><term>Doigts de zinc (génétique)</term><term>Doigts de zinc (physiologie)</term><term>Données de séquences moléculaires (MeSH)</term><term>Expression des gènes (MeSH)</term><term>Facteurs de transcription (métabolisme)</term><term>Gravitropisme (génétique)</term><term>Gravitropisme (physiologie)</term><term>Gènes de plante (MeSH)</term><term>Histidine (MeSH)</term><term>Mécanotransduction cellulaire (MeSH)</term><term>Phénomènes mécaniques (MeSH)</term><term>Populus (génétique)</term><term>Populus (métabolisme)</term><term>Populus (physiologie)</term><term>Régions promotrices (génétique) (MeSH)</term><term>Régulation de l'expression des gènes végétaux (MeSH)</term><term>Stress physiologique (MeSH)</term><term>Séquence nucléotidique (MeSH)</term><term>Tiges de plante (MeSH)</term><term>Tolérance au sel (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="isolation & purification" xml:lang="en"><term>DNA, Complementary</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>RNA, Messenger</term><term>Transcription Factors</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Cysteine</term><term>Histidine</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Gravitropism</term><term>Populus</term><term>Zinc Fingers</term></keywords><keywords scheme="MESH" 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Phenomena</term><term>Mechanotransduction, Cellular</term><term>Molecular Sequence Data</term><term>Plant Stems</term><term>Promoter Regions, Genetic</term><term>Salt Tolerance</term><term>Stress, Physiological</term><term>Trees</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Adaptation physiologique</term><term>Arbres</term><term>Cystéine</term><term>Données de séquences moléculaires</term><term>Expression des gènes</term><term>Gènes de plante</term><term>Histidine</term><term>Mécanotransduction cellulaire</term><term>Phénomènes mécaniques</term><term>Régions promotrices (génétique)</term><term>Régulation de l'expression des gènes végétaux</term><term>Stress physiologique</term><term>Séquence nucléotidique</term><term>Tiges de plante</term><term>Tolérance au sel</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In plants, mechanoperception and transduction of mechanical signals have been studied essentially in Arabidopsis thaliana L. and Lycopersicon esculentum L. plants, i.e., in nonwoody plants. Here, we have described the isolation of both the full-length cDNA and the regulatory region of PtaZFP2, encoding a member of Cys2/His2 zinc finger protein (ZFP) family in Populus tremula L. x Populus alba L. Time course analysis of expression demonstrated that PtaZFP2 mRNA accumulated as early as 5 min in response to a controlled stem bending and is restricted to the organ where the mechanical stimulus is applied. The real-time quantitative Reverse Transcriptase Polymerase Chain Reaction experiments showed that PtaZFP2 was also rapidly up-regulated in poplar stems in response to gravitropism suggesting that PtaZFP2 is induced by different mechanical signals. Abundance of PtaZFP2 transcripts also increased highly in response to wounding and to a weaker extent to salt treatment and cold, which is consistent with the numerous putative cis-elements found in its regulatory region. As in other species, these data suggest that Cys2/His2 ZFPs could function in poplar as key transcriptional regulators in the acclimation response to different environmental factors.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">19203938</PMID><DateCompleted><Year>2009</Year><Month>03</Month><Day>26</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>01</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0829-318X</ISSN><JournalIssue CitedMedium="Print"><Volume>29</Volume><Issue>1</Issue><PubDate><Year>2009</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Tree physiology</Title><ISOAbbreviation>Tree Physiol</ISOAbbreviation></Journal><ArticleTitle>Characterization and expression analysis under bending and other abiotic factors of PtaZFP2, a poplar gene encoding a Cys2/His2 zinc finger protein.</ArticleTitle><Pagination><MedlinePgn>125-36</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/treephys/tpn011</ELocationID><Abstract><AbstractText>In plants, mechanoperception and transduction of mechanical signals have been studied essentially in Arabidopsis thaliana L. and Lycopersicon esculentum L. plants, i.e., in nonwoody plants. Here, we have described the isolation of both the full-length cDNA and the regulatory region of PtaZFP2, encoding a member of Cys2/His2 zinc finger protein (ZFP) family in Populus tremula L. x Populus alba L. Time course analysis of expression demonstrated that PtaZFP2 mRNA accumulated as early as 5 min in response to a controlled stem bending and is restricted to the organ where the mechanical stimulus is applied. The real-time quantitative Reverse Transcriptase Polymerase Chain Reaction experiments showed that PtaZFP2 was also rapidly up-regulated in poplar stems in response to gravitropism suggesting that PtaZFP2 is induced by different mechanical signals. Abundance of PtaZFP2 transcripts also increased highly in response to wounding and to a weaker extent to salt treatment and cold, which is consistent with the numerous putative cis-elements found in its regulatory region. As in other species, these data suggest that Cys2/His2 ZFPs could function in poplar as key transcriptional regulators in the acclimation response to different environmental factors.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Martin</LastName><ForeName>Ludovic</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>UMR547 PIAF, Univ Blaise Pascal, F-63177 Aubiére, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Leblanc-Fournier</LastName><ForeName>Nathalie</ForeName><Initials>N</Initials></Author><Author ValidYN="Y"><LastName>Azri</LastName><ForeName>Wassim</ForeName><Initials>W</Initials></Author><Author ValidYN="Y"><LastName>Lenne</LastName><ForeName>Catherine</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Henry</LastName><ForeName>Clémence</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Coutand</LastName><ForeName>Catherine</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Julien</LastName><ForeName>Jean-Louis</ForeName><Initials>JL</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2008</Year><Month>12</Month><Day>03</Day></ArticleDate></Article><MedlineJournalInfo><Country>Canada</Country><MedlineTA>Tree Physiol</MedlineTA><NlmUniqueID>100955338</NlmUniqueID><ISSNLinking>0829-318X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018076">DNA, Complementary</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012333">RNA, Messenger</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014157">Transcription Factors</NameOfSubstance></Chemical><Chemical><RegistryNumber>4QD397987E</RegistryNumber><NameOfSubstance UI="D006639">Histidine</NameOfSubstance></Chemical><Chemical><RegistryNumber>K848JZ4886</RegistryNumber><NameOfSubstance UI="D003545">Cysteine</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000222" MajorTopicYN="Y">Adaptation, Physiological</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001483" MajorTopicYN="N">Base Sequence</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D003545" MajorTopicYN="N">Cysteine</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018076" MajorTopicYN="N">DNA, Complementary</DescriptorName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D015870" MajorTopicYN="N">Gene Expression</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="Y">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017343" MajorTopicYN="Y">Genes, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018522" MajorTopicYN="N">Gravitropism</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D006639" MajorTopicYN="N">Histidine</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D055595" MajorTopicYN="N">Mechanical Phenomena</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D040542" MajorTopicYN="Y">Mechanotransduction, Cellular</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018547" MajorTopicYN="N">Plant Stems</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011401" MajorTopicYN="N">Promoter Regions, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012333" MajorTopicYN="N">RNA, Messenger</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D055049" MajorTopicYN="N">Salt Tolerance</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013312" MajorTopicYN="N">Stress, Physiological</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014157" MajorTopicYN="N">Transcription Factors</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016335" MajorTopicYN="N">Zinc Fingers</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2009</Year><Month>2</Month><Day>11</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2009</Year><Month>2</Month><Day>11</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2009</Year><Month>3</Month><Day>27</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">19203938</ArticleId><ArticleId IdType="pii">tpn011</ArticleId><ArticleId IdType="doi">10.1093/treephys/tpn011</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>France</li></country><region><li>Auvergne (région administrative)</li><li>Auvergne-Rhône-Alpes</li></region><settlement><li>Aubiére</li></settlement></list><tree><noCountry><name sortKey="Azri, Wassim" sort="Azri, Wassim" uniqKey="Azri W" first="Wassim" last="Azri">Wassim Azri</name><name sortKey="Coutand, Catherine" sort="Coutand, Catherine" uniqKey="Coutand C" first="Catherine" last="Coutand">Catherine Coutand</name><name sortKey="Henry, Clemence" sort="Henry, Clemence" uniqKey="Henry C" first="Clémence" last="Henry">Clémence Henry</name><name sortKey="Julien, Jean Louis" sort="Julien, Jean Louis" uniqKey="Julien J" first="Jean-Louis" last="Julien">Jean-Louis Julien</name><name sortKey="Leblanc Fournier, Nathalie" sort="Leblanc Fournier, Nathalie" uniqKey="Leblanc Fournier N" first="Nathalie" last="Leblanc-Fournier">Nathalie Leblanc-Fournier</name><name sortKey="Lenne, Catherine" sort="Lenne, Catherine" uniqKey="Lenne C" first="Catherine" last="Lenne">Catherine Lenne</name></noCountry><country name="France"><region name="Auvergne-Rhône-Alpes"><name sortKey="Martin, Ludovic" sort="Martin, Ludovic" uniqKey="Martin L" first="Ludovic" last="Martin">Ludovic Martin</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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